20.03.2026 aktualisiert
100 % verfügbar
Bioimage Analyst / Data Steward
Heidelberg, Deutschland
Heidelberg +100 km
Dr. rer. nat. in biology (magna cum laude)Über mich
I am a biologist with a strong focus on bioimage analysis and extensive experience in wet lab techniques. I excel in image processing with FIJI and Python, and I am committed to contributing to team success. I confidently embrace innovative ideas to enhance and optimize existing workflows.
Skills
Akademisches SchreibenChromatographieUnterrichtenAutomatisierungBig DataComputerprogrammierungBildanalyseInformation EngineeringRelationale DatenbankenGitHubPythonLabortechnikenMachine LearningInstandhaltungForschungsmethoden
Image Analysis and Processing
Advanced expertise in bioimage analysis using ImageJ/FIJI and Python with libraries including NumPy, Pandas, Matplotlib, Scikit-image, Scikit-learn, and PyTorch for automated segmentation and quantitative analysis of microscopic datasets
Wet Laboratory Techniques
Comprehensive experience in light and fluorescence microscopy, C. elegans culture maintenance, and phytoanalytics including HPLC, LC-MS/MS, GC, and TLC methods
Data Management and Analysis
Proficient in OMERO for managing image data and metadata, statistical analysis in R, and FAIR principles for scientific data publishing and provenance
Programming and Software Development
Python programming for machine learning, big data analytics, and data engineering applications with version control using git and GitHub
Database Management
Experience with relational databases using SQL for data storage and retrieval
Research Methodology
Extensive background in plant extract analysis, compound identification, and effects testing on model organisms with publication experience
Teaching and Supervision
University-level teaching skills with experience supervising practical courses, seminars, internships, and bachelor theses over multiple years
Scientific Communication
Strong publication record with peer-reviewed papers and book chapters, plus experience in scientific writing and data presentation
Advanced expertise in bioimage analysis using ImageJ/FIJI and Python with libraries including NumPy, Pandas, Matplotlib, Scikit-image, Scikit-learn, and PyTorch for automated segmentation and quantitative analysis of microscopic datasets
Wet Laboratory Techniques
Comprehensive experience in light and fluorescence microscopy, C. elegans culture maintenance, and phytoanalytics including HPLC, LC-MS/MS, GC, and TLC methods
Data Management and Analysis
Proficient in OMERO for managing image data and metadata, statistical analysis in R, and FAIR principles for scientific data publishing and provenance
Programming and Software Development
Python programming for machine learning, big data analytics, and data engineering applications with version control using git and GitHub
Database Management
Experience with relational databases using SQL for data storage and retrieval
Research Methodology
Extensive background in plant extract analysis, compound identification, and effects testing on model organisms with publication experience
Teaching and Supervision
University-level teaching skills with experience supervising practical courses, seminars, internships, and bachelor theses over multiple years
Scientific Communication
Strong publication record with peer-reviewed papers and book chapters, plus experience in scientific writing and data presentation
Sprachen
DeutschverhandlungssicherEnglischverhandlungssicher
Projekthistorie
Developing workflow for automated segmentation and quantitative analysis of microscopic C. elegans image datasets, providing support to students in quantitative analysis of widefield multi-channel fluorescence microscopy data, introducing OMERO for managing image data and metadata, training students in FAIR principles and good practices for publishing scientific image data
Assisted with statistical analysis in R and prepared images for publication with multiple DOI references
Tested effects of isoliquiritigenin on model organism C. elegans, analysed plant extracts on HPLC and LC-MS for compound identification, maintained equipment
Zertifikate
Data Scientist
Alfatraining2021